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ybaE uncharacterized protein YbaE [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 949093, updated on 23-Nov-2023

Summary

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Gene symbol
ybaE
Gene description
uncharacterized protein YbaE
Primary source
ASAP:ABE-0001542
Locus tag
b0445
See related
ECOCYC:EG13217
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0439
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Genomic context

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Sequence:
NC_000913.3 (465612..467312, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene long-chain acyl-CoA thioesterase FadM Neighboring gene 7-cyano-7-deazaguanine synthase Neighboring gene HMP-PP phosphatase Neighboring gene DNA-binding transcriptional activator DecR

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  2. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  3. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables peptide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in peptide transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in outer membrane-bounded periplasmic space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein YbaE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    465612..467312 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414979.1 uncharacterized protein YbaE [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414979.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5C9AQD7
    Conserved Domains (1) summary
    COG4533
    Location:1 → 562
    SgrR; DNA-binding transcriptional regulator SgrR of sgrS sRNA, contains a MarR-type HTH domain and a periplasmic-type solute-binding domain [Transcription]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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