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rcnB periplasmic protein involved in nickel/cobalt export [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 949080, updated on 19-Sep-2024

Summary

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Official Symbol
rcnB
Official Full Name
periplasmic protein involved in nickel/cobalt export
Primary source
ECOCYC:G7139
Locus tag
b2107
See related
ASAP:ABE-0006970
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2100; yohN
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Genomic context

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Sequence:
NC_000913.3 (2186960..2187298)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor RcnR Neighboring gene Ni(2(+))/Co(2(+)) exporter Neighboring gene putative fimbrial adhesin YehA Neighboring gene putative fimbrial usher protein YehB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cu binding by the Escherichia coli metal-efflux accessory protein RcnB. Blériot C, et al. Metallomics, 2014 Aug. PMID 24658095
  2. Combined systems approaches reveal highly plastic responses to antimicrobial peptide challenge in Escherichia coli. Kozlowska J, et al. PLoS Pathog, 2014 May. PMID 24789011, Free PMC Article
  3. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
  4. RcnB is a periplasmic protein essential for maintaining intracellular Ni and Co concentrations in Escherichia coli. Blériot C, et al. J Bacteriol, 2011 Aug. PMID 21665978, Free PMC Article
  5. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. RcnB is essential for maintaining intracellular levels of Ni and Co.
    Title: RcnB is a periplasmic protein essential for maintaining intracellular Ni and Co concentrations in Escherichia coli.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables copper ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within DNA damage response IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to cobalt ion IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to cobalt ion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to nickel cation IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to nickel cation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to peptide IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to peptide IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in outer membrane-bounded periplasmic space IDA
Inferred from Direct Assay
more info
 PubMed 
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
periplasmic protein involved in nickel/cobalt export

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2186960..2187298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416610.4 periplasmic protein involved in nickel/cobalt export [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416610.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376M5Y6
    Conserved Domains (1) summary
    COG5455
    Location:1 → 108
    RcnB; Periplasmic regulator RcnB of Ni and Co efflux [Inorganic ion transport and metabolism]
Nucleotide Protein
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