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araJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 949077, updated on 11-Sep-2024

Summary

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Official Symbol
araJ
Primary source
ECOCYC:EG10060
Locus tag
b0396
See related
ASAP:ABE-0001378
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
araT; ECK0390
Summary
Major Facilitator Superfamily (MFS). [More information is available at EcoGene: EG10060]. The AraJ protein is an uncharacterised member of the major facilitator superfamily (MFS) of transporters . [More information is available at EcoCyc: EG10060].
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Genomic context

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Sequence:
NC_000913.3 (411297..412481, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene nucleoid-associated protein RdgC Neighboring gene fructokinase Neighboring gene ATP-dependent structure-specific DNA nuclease - SbcC subunit Neighboring gene ATP-dependent structure-specific DNA nuclease - SbcD subunit Neighboring gene DNA-binding transcriptional dual regulator PhoB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Alignment of genes from the 9-minute region (araJ to tsx) of the Escherichia coli K-12 linkage map to the physical map. Lucht JM, et al. J Bacteriol, 1992 Mar. PMID 1537816, Free PMC Article
  2. Mutational analysis of residue roles in AraC function. Ross JJ, et al. J Mol Biol, 2003 Apr 18. PMID 12683999
  3. Arabinose-inducible promoter from Escherichia coli. Its cloning from chromosomal DNA, identification as the araFG promoter and sequence. Kosiba BE, et al. J Mol Biol, 1982 Mar 25. PMID 7047752
  4. Mapping, sequence, and apparent lack of function of araJ, a gene of the Escherichia coli arabinose regulon. Reeder T, et al. J Bacteriol, 1991 Dec. PMID 1744033, Free PMC Article
  5. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative transport protein AraJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    411297..412481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414930.3 putative transport protein AraJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414930.3

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7D7EZN0
    Conserved Domains (1) summary
    PRK10091
    Location:1 → 382
    PRK10091; MFS transport protein AraJ; Provisional
Nucleotide Protein
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