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focB formate channel FocB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 949032, updated on 22-Sep-2022

Summary

Gene symbol
focB
Gene description
formate channel FocB
Primary source
ASAP:ABE-0008206
Locus tag
b2492
See related
ECOCYC:G7309
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2488
Summary
FocB is a putative formate transporter, belonging to the FNT family of formate and nitrite transporters . [More information is available at EcoCyc: G7309].
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Genomic context

Sequence:
NC_000913.3 (2613934..2614782)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene hydrogenase 4 catalytic subunit HyfI Neighboring gene putative hydrogenase 4 assembly protein Neighboring gene DNA-binding transcriptional activator HyfR Neighboring gene putative transporter YfgO Neighboring gene beta-barrel assembly-enhancing protease

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables formate transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables formate transmembrane transporter activity IGI
Inferred from Genetic Interaction
more info
PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
involved_in formate transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within formate transport IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within mixed acid fermentation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2613934..2614782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416987.1 formate channel FocB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416987.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P77733
    Conserved Domains (1) summary
    PRK09713
    Location:1281
    focB; formate transporter