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trpR transcriptional repressor, tryptophan-binding [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948917, updated on 22-May-2018

Summary

Gene symbol
trpR
Gene description
transcriptional repressor, tryptophan-binding
Primary source
EcoGene:EG11029
Locus tag
b4393
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4385; JW4356

Genomic context

Sequence:
NC_000913.3 (4632760..4633086)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene energy-dependent translational throttle A Neighboring gene lytic murein transglycosylase, soluble Neighboring gene non-canonical purine NTP phosphatase, ITPase/XTPase Neighboring gene phosphatase Neighboring gene right oriC-binding transcriptional activator, AraC family

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of transcription, DNA-templated IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Names
transcriptional repressor, tryptophan-binding
NP_418810.1
  • regulator for trp operon and aroH; trp aporepressor

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4632760..4633086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418810.1 transcriptional repressor, tryptophan-binding [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418810.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0A881
    Conserved Domains (1) summary
    COG2973
    Location:6108
    TrpR; Trp operon repressor [Transcription]
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