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yjjQ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948896, updated on 11-Sep-2024

Summary

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Official Symbol
yjjQ
Primary source
ECOCYC:G7947
Locus tag
b4365
See related
ASAP:ABE-0014322
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4355
Summary
YjjQ may play a role in detoxification of methylglyoxal (MG) and dihydroxyacetone (DHA) . [More information is available at EcoCyc: G7947].
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Genomic context

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Sequence:
NC_000913.3 (4603477..4604202)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene primosomal protein DnaT Neighboring gene putative succinate exporter YjjB Neighboring gene putative succinate exporter YjjP Neighboring gene DNA-binding transcriptional regulator BglJ Neighboring gene ferric-siderophore reductase FhuF Neighboring gene DUF1435 domain-containing protein YjjZ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. LuxR family transcriptional repressor YjjQ modulates the biofilm formation and motility of avian pathogenic Escherichia coli. Fu D, et al. Res Vet Sci, 2022 Dec 20. PMID 35901637
  2. YjjQ Represses Transcription of flhDC and Additional Loci in Escherichia coli. Wiebe H, et al. J Bacteriol, 2015 Aug. PMID 26078445, Free PMC Article
  3. Characterization of a yjjQ mutant of avian pathogenic Escherichia coli (APEC). Li G, et al. Microbiology (Reading), 2008 Apr. PMID 18375801
  4. Genome-wide screen for Salmonella genes required for long-term systemic infection of the mouse. Lawley TD, et al. PLoS Pathog, 2006 Feb. PMID 16518469, Free PMC Article
  5. Identification of genes required for avian Escherichia coli septicemia by signature-tagged mutagenesis. Li G, et al. Infect Immun, 2005 May. PMID 15845486, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. LuxR family transcriptional repressor YjjQ modulates the biofilm formation and motility of avian pathogenic Escherichia coli.
    Title: LuxR family transcriptional repressor YjjQ modulates the biofilm formation and motility of avian pathogenic Escherichia coli.
  2. We characterize YjjQ as transcriptional repressor of flagellar motility and of additional loci related to pathogenicity.
    Title: YjjQ Represses Transcription of flhDC and Additional Loci in Escherichia coli.
Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to methylglyoxal IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding transcriptional repressor YjjQ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4603477..4604202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418785.1 DNA-binding transcriptional repressor YjjQ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418785.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9AQ71, D8AC72
    Conserved Domains (1) summary
    COG2197
    Location:10 → 203
    CitB; DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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