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fimF type 1 fimbriae minor subunit FimF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948845, updated on 6-May-2021

Summary

Gene symbol
fimF
Gene description
type 1 fimbriae minor subunit FimF
Primary source
ASAP:ABE-0014153
Locus tag
b4318
See related
ECOCYC:EG10313
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4309
Summary
One of 25 FimA homologs in EcoGene. [More information is available at EcoGene: EG10313]. FimF is a minor component of the type 1 fimbriae in Escherichia coli Two-dimensional gel electrophoresis indicated that FimF has a molecular weight of 18.0 kDa and exists in a 1:100 ratio with the major fimbrial subunit, FimA . [More information is available at EcoCyc: EG10313].
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Genomic context

Sequence:
NC_000913.3 (4547742..4548272)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene type 1 fimbriae periplasmic chaperone Neighboring gene type I fimbriae usher protein Neighboring gene type 1 fimbriae minor subunit FimG Neighboring gene type 1 fimbriae D-mannose specific adhesin

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Process Evidence Code Pubs
acts_upstream_of_or_within cell adhesion IEA
Inferred from Electronic Annotation
more info
 
involved_in cell adhesion involved in single-species biofilm formation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within pilus assembly IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in pilus organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in pilus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in pilus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
type 1 fimbriae minor subunit FimF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4547742..4548272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418738.1 type 1 fimbriae minor subunit FimF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418738.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P08189
    Conserved Domains (1) summary
    COG3539
    Location:1176
    FimA; Pilin (type 1 fimbria component protein) [Cell motility]
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