Format

Send to:

Choose Destination

ccmF holocytochrome c synthase CcmF component [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948783, updated on 6-May-2021

Summary

Gene symbol
ccmF
Gene description
holocytochrome c synthase CcmF component
Primary source
ASAP:ABE-0007269
Locus tag
b2196
See related
ECOCYC:EG12054
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2188; yejR
Summary
Overexpression causes a decrease in the amount of biofilm formed. [More information is available at EcoGene: EG12054]. CcmF is a membrane protein component of the CcmEFGH holocytochrome c synthetase. [More information is available at EcoCyc: EG12054].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_000913.3 (2292961..2294904, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator NarP Neighboring gene holocytochrome c synthase CcmH component Neighboring gene thiol:disulfide oxidoreductase CcmG Neighboring gene periplasmic heme chaperone Neighboring gene cytochrome c maturation protein D Neighboring gene cytochrome c maturation protein C Neighboring gene cytochrome c maturation protein B Neighboring gene cytochrome c maturation protein A

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables heme binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables heme transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in integral component of plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
holocytochrome c synthase CcmF component

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2292961..2294904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416700.1 holocytochrome c synthase CcmF component [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416700.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P33927
    Conserved Domains (1) summary
    TIGR00353
    Location:53634
    nrfE; c-type cytochrome biogenesis protein CcmF
Support Center