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ulaF L-ribulose-5-phosphate 4-epimerase UlaF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948711, updated on 11-Apr-2024

Summary

Gene symbol
ulaF
Gene description
L-ribulose-5-phosphate 4-epimerase UlaF
Primary source
ASAP:ABE-0013734
Locus tag
b4198
See related
ECOCYC:G7860
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4194; sgaE; yjfX
Summary
The ula divergon is comprised of the two divergent ulaGR and ulaABCDEF operons. [More information is available at EcoGene: EG12498]. L-ribulose 5-phosphate 4-epimerase is an enzyme in the pathway of anaerobic L-ascorbate degradation . [More information is available at EcoCyc: G7860].
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Genomic context

Sequence:
NC_000913.3 (4423700..4424386)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene L-ascorbate specific PTS enzyme IIA component Neighboring gene 3-keto-L-gulonate-6-phosphate decarboxylase UlaD Neighboring gene L-ribulose-5-phosphate 3-epimerase UlaE Neighboring gene DUF1471 domain-containing protein YjfY Neighboring gene 30S ribosomal subunit protein S6

Pathways from PubChem

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables L-ribulose-phosphate 4-epimerase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables L-ribulose-phosphate 4-epimerase activity IEA
Inferred from Electronic Annotation
more info
 
enables aldehyde-lyase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in L-ascorbic acid catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in L-ascorbic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within L-ascorbic acid metabolic process IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in monosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in pentose catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
L-ribulose-5-phosphate 4-epimerase UlaF
NP_418619.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4423700..4424386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418619.1 L-ribulose-5-phosphate 4-epimerase UlaF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418619.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7A6KFJ7, A0A8S7EAR9, F4UY33
    Conserved Domains (1) summary
    PRK12348
    Location:1228
    sgaE; L-ribulose-5-phosphate 4-epimerase; Reviewed