U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

bsmA DUF1471 domain-containing putative lipoprotein BsmA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948708, updated on 26-Mar-2025

Summary

Go to the top of the page Help
Official Symbol
bsmA
Official Full Name
DUF1471 domain-containing putative lipoprotein BsmA
Primary source
ECOCYC:G7852
Locus tag
b4189
See related
ASAP:ABE-0013706
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4185; yjfO
Summary
First 24 aa are a predicted type II signal peptide. [More information is available at EcoGene: EG12489].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (4416441..4416770, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative acyl-CoA dehydrogenase AidB Neighboring gene protease activator YjfN Neighboring gene carboxylesterase Neighboring gene DNA-binding transcriptional repressor UlaR Neighboring gene L-ascorbate-6-phosphate lactonase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Low molecular weight proteins: a challenge for post-genomic research. Rudd KE, et al. Electrophoresis, 1998 Apr. PMID 9588799
  2. A previously uncharacterized gene, yjfO (bsmA), influences Escherichia coli biofilm formation and stress response. Weber MM, et al. Microbiology (Reading), 2010 Jan. PMID 19833773, Free PMC Article
  3. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
  4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
  5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. yjfO mutants are altered in biofilm structure and cell motility, and in their ability as biofilms to respond to pH and oxidative stresses.
    Title: A previously uncharacterized gene, yjfO (bsmA), influences Escherichia coli biofilm formation and stress response.
Submit: New GeneRIF Correction

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within DNA damage response IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to stress IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within single-species biofilm formation IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
DUF1471 domain-containing putative lipoprotein BsmA

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4416441..4416770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418610.4 DUF1471 domain-containing putative lipoprotein BsmA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418610.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1V2GK16
    Conserved Domains (1) summary
    PRK14864
    Location:6 → 109
    PRK14864; biofilm peroxide resistance protein BsmA
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.