U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

adiA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948638, updated on 11-Sep-2024

Summary

Official Symbol
adiA
Primary source
ECOCYC:EG11501
Locus tag
b4117
See related
ASAP:ABE-0013483
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
adi; ECK4110
Summary
AdiA is homologous to CadA, SpeC, and SpeF. [More information is available at EcoGene: EG11501]. Escherichia coli contains two types of arginine decarboxylase. [More information is available at EcoCyc: EG11501].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_000913.3 (4338254..4340521, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene arginine:agmatine antiporter Neighboring gene DNA-binding transcriptional activator AdiY Neighboring gene DNA-binding transcriptional dual regulator MelR Neighboring gene alpha-galactosidase

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables arginine decarboxylase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables arginine decarboxylase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables arginine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 
enables carboxy-lyase activity IEA
Inferred from Electronic Annotation
more info
 
enables pyridoxal phosphate binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables pyridoxal phosphate binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in arginine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within arginine catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within intracellular pH elevation IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
arginine decarboxylase, degradative
NP_418541.2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4338254..4340521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418541.2 arginine decarboxylase, degradative [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418541.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X3J976, W8SXR0
    Conserved Domains (1) summary
    PRK15029
    Location:1755
    PRK15029; arginine decarboxylase; Provisional