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rdcB regulator of diguanylate cyclase RdcB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948633, updated on 17-Jul-2025
Official Symbol
rdcB
Official Full Name
regulator of diguanylate cyclase RdcB
Primary source
ECOCYC:G7823
Locus tag
b4110
See related
ASAP:ABE-0013459
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4103; yjcZ
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Sequence:
NC_000913.3 (4329360..4330238)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene PF06983 family protein YjdN Neighboring gene zinc ribbon domain-containing protein YjdM Neighboring gene regulator of diguanylate cyclase RdcA Neighboring gene osmolyte:H(+) symporter ProP Neighboring gene small regulatory membrane protein PmrR Neighboring gene sensor histidine kinase BasS

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A comprehensive genetic characterization of bacterial motility. Girgis HS, et al. PLoS Genet, 2007 Sep. PMID 17941710, Free PMC Article
  2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
  3. Genetic dissection of Escherichia coli's master diguanylate cyclase DgcE: Role of the N-terminal MASE1 domain and direct signal input from a GTPase partner system. Pfiffer V, et al. PLoS Genet, 2019 Apr. PMID 31022167, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of single-species biofilm formation on inanimate substrate IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Preferred Names
regulator of diguanylate cyclase RdcB

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4329360..4330238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418534.4 regulator of diguanylate cyclase RdcB

    See identical proteins and their annotated locations for NP_418534.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8H9XSQ2
    Conserved Domains (1) summary
    pfam13990
    Location:21 → 287
    YjcZ; YjcZ-like protein
Nucleotide Protein
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