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rdcB regulator of diguanylate cyclase RdcB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948633, updated on 3-Dec-2024

Summary

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Official Symbol
rdcB
Official Full Name
regulator of diguanylate cyclase RdcB
Primary source
ECOCYC:G7823
Locus tag
b4110
See related
ASAP:ABE-0013459
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4103; yjcZ
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Genomic context

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Sequence:
NC_000913.3 (4329360..4330238)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene PF06983 family protein YjdN Neighboring gene zinc ribbon domain-containing protein YjdM Neighboring gene regulator of diguanylate cyclase RdcA Neighboring gene osmolyte:H(+) symporter ProP Neighboring gene small regulatory membrane protein PmrR Neighboring gene sensor histidine kinase BasS

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comprehensive genetic characterization of bacterial motility. Girgis HS, et al. PLoS Genet, 2007 Sep. PMID 17941710, Free PMC Article
  2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
regulator of diguanylate cyclase RdcB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4329360..4330238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418534.4 regulator of diguanylate cyclase RdcB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418534.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8H9XSQ2
    Conserved Domains (1) summary
    pfam13990
    Location:21 → 287
    YjcZ; YjcZ-like protein
Nucleotide Protein
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