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kdgT 2-dehydro-3-deoxy-D-gluconate:H(+) symporter [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948407, updated on 22-Sep-2022

Summary

Gene symbol
kdgT
Gene description
2-dehydro-3-deoxy-D-gluconate:H(+) symporter
Primary source
ASAP:ABE-0012764
Locus tag
b3909
See related
ECOCYC:EG11869
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3902
Summary
KdgT is a probable 2-keto-3-deoxy-D-gluconate (KDG) uptake system. [More information is available at EcoCyc: EG11869].
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Genomic context

Sequence:
NC_000913.3 (4101690..4102673)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional activator RhaR Neighboring gene rhamnose/lyxose:H(+) symporter Neighboring gene superoxide dismutase (Mn) Neighboring gene 6-hydroxyaminopurine reductase Neighboring gene sensor histidine kinase CpxA Neighboring gene DNA-binding transcriptional dual regulator CpxR

Pathways from PubChem

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables 2-keto-3-deoxygluconate:proton symporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables 2-keto-3-deoxygluconate:proton symporter activity IEA
Inferred from Electronic Annotation
more info
 
enables carbohydrate:proton symporter activity IEA
Inferred from Electronic Annotation
more info
 
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in 2-keto-3-deoxygluconate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in carbohydrate transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within gluconate transmembrane transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
2-dehydro-3-deoxy-D-gluconate:H(+) symporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4101690..4102673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418345.2 2-dehydro-3-deoxy-D-gluconate:H(+) symporter [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418345.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0A712
    Conserved Domains (1) summary
    PRK05274
    Location:1321
    PRK05274; 2-keto-3-deoxygluconate permease; Provisional