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yidQ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948199, updated on 11-Sep-2024

Summary

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Official Symbol
yidQ
Primary source
ECOCYC:EG11712
Locus tag
b3688
See related
ASAP:ABE-0012063
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ecfI; ECK3680
Summary
yceK and yidQ are paralogs. [More information is available at EcoGene: EG11712]. YidQ is a protein with a possible extracytoplasmic function . [More information is available at EcoCyc: EG11712].
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Genomic context

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Sequence:
NC_000913.3 (3867728..3868060)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene small heat shock protein IbpB Neighboring gene small heat shock protein IbpA Neighboring gene DUF3748 domain-containing galacturonate catabolism protein YidR Neighboring gene colicin M resistance protein Neighboring gene D-galactonate:H(+) symporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic Localization of Escherichia coli Membrane Proteins. Sueki A, et al. mSystems, 2020 Mar 3. PMID 32127419, Free PMC Article
  2. Characterization of the Escherichia coli sigma E regulon. Dartigalongue C, et al. J Biol Chem, 2001 Jun 15. PMID 11274153
  3. DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication. Burland V, et al. Genomics, 1993 Jun. PMID 7686882
  4. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
  5. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within DNA damage response IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cell outer membrane HDA PubMed 

General protein information

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Preferred Names
DUF1375 domain-containing putative lipoprotein YidQ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3867728..3868060
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418143.2 DUF1375 domain-containing putative lipoprotein YidQ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418143.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T5YE99
    Conserved Domains (1) summary
    PRK11616
    Location:2 → 110
    PRK11616; hypothetical protein; Provisional
Nucleotide Protein
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