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yicJ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948168, updated on 24-Aug-2024

Summary

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Official Symbol
yicJ
Primary source
ASAP:ABE-0011953
Locus tag
b3657
See related
ECOCYC:EG11686
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3647
Summary
YicJ is a possible sugar transporter for the YicI substrates. yicJ is possibly in a operon with downstream yicI. [More information is available at EcoGene: EG11686]. The YicJ protein is an uncharacterised member of the GPH family of galactose-pentose-hexuronide transporters . [More information is available at EcoCyc: EG11686].
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Genomic context

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Sequence:
NC_000913.3 (3834547..3835929, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene AsmA family protein YicH Neighboring gene alpha-D-xyloside xylohydrolase Neighboring gene tRNA-Sec Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yicJI metabolic operon of Escherichia coli is involved in bacterial fitness. Répérant M, et al. FEMS Microbiol Lett, 2011 Jun. PMID 21477255
  2. Cation and sugar selectivity determinants in a novel family of transport proteins. Poolman B, et al. Mol Microbiol, 1996 Mar. PMID 8830272
  3. Conserved and variable functions of the sigmaE stress response in related genomes. Rhodius VA, et al. PLoS Biol, 2006 Jan. PMID 16336047, Free PMC Article
  4. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212
  5. The major facilitator superfamily. Saier MH Jr, et al. J Mol Microbiol Biotechnol, 1999 Nov. PMID 10943556

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. YicJI operon is necessary for its fitness under all the growth conditions.
    Title: The yicJI metabolic operon of Escherichia coli is involved in bacterial fitness.
Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables symporter activity IEA
Inferred from Electronic Annotation
more info
  
enables transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in carbohydrate transport IEA
Inferred from Electronic Annotation
more info
  
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative xyloside transporter YicJ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3834547..3835929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418114.4 putative xyloside transporter YicJ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418114.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6L7CIA1
    Conserved Domains (1) summary
    PRK11462
    Location:1 → 460
    PRK11462; putative transporter; Provisional
Nucleotide Protein
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