Format

Send to:

Choose Destination

waaL O-antigen ligase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948148, updated on 6-May-2021

Summary

Gene symbol
waaL
Gene description
O-antigen ligase
Primary source
ASAP:ABE-0011849
Locus tag
b3622
See related
ECOCYC:EG11424
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3612; rfaL
Summary
The lipopolysaccharide of Escherichia coli K-12 consists of two major components: the hydrophobic lipid A moiety inserted into the outer membrane and the phosphorylated core oligosaccharide . [More information is available at EcoCyc: EG11424].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_000913.3 (3796948..3798207)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ADP-heptose--LPS heptosyltransferase 2 Neighboring gene ADP-heptose:LPS heptosyltransferase 1 Neighboring gene protein YibX;protein YibX-S Neighboring gene protein YibY Neighboring gene putative ADP-heptose:LPS heptosyltransferase 4 Neighboring gene lipopolysaccharide core biosynthesis protein WaaZ

Bibliography

Pathways from PubChem

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables glycosyltransferase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables ligase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of plasma membrane ISM
Inferred from Sequence Model
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3796948..3798207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418079.1 O-antigen ligase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418079.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P27243
    Conserved Domains (1) summary
    COG3307
    Location:1393
    RfaL; O-antigen ligase [Cell wall/membrane/envelope biogenesis]
Support Center