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yibQ [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948128, updated on 24-Aug-2024

Summary

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Official Symbol
yibQ
Primary source
ECOCYC:EG12298
Locus tag
b3614
See related
ASAP:ABE-0011824
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3604
Summary
Based on sequence similarity, YibQ is predicted to be a nucleoside (IDP) diphosphatase . [More information is available at EcoCyc: EG12298].
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Genomic context

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Sequence:
NC_000913.3 (3788101..3789060)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Neighboring gene murein hydrolase activator EnvC Neighboring gene UDP-glucuronate:LPS(HepIII) glycosyltransferase Neighboring gene threonine dehydrogenase Neighboring gene 2-amino-3-ketobutyrate CoA ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR). Reed JL, et al. Genome Biol, 2003. PMID 12952533, Free PMC Article
  2. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
divergent polysaccharide deacetylase domain-containing protein YibQ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3788101..3789060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418071.4 divergent polysaccharide deacetylase domain-containing protein YibQ [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418071.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A828PBN8
    Conserved Domains (1) summary
    COG2861
    Location:19 → 242
    YibQ; Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family [Carbohydrate transport and metabolism]
Nucleotide Protein
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