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xylF xylose ABC transporter periplasmic binding protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948090, updated on 6-May-2021

Summary

Gene symbol
xylF
Gene description
xylose ABC transporter periplasmic binding protein
Primary source
ASAP:ABE-0011646
Locus tag
b3566
See related
ECOCYC:EG20252
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3555; xylT
Summary
XylF is the periplasmic binding component of the XylFGH xylose ABC transporter. [More information is available at EcoCyc: EG20252].
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Genomic context

Sequence:
NC_000913.3 (3731131..3732123)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene xylulokinase Neighboring gene xylose isomerase Neighboring gene xylose ABC transporter ATP binding subunit Neighboring gene xylose ABC transporter membrane subunit Neighboring gene DNA-binding transcriptional dual regulator XylR

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables carbohydrate binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables monosaccharide binding IEA
Inferred from Electronic Annotation
more info
 
enables monosaccharide binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables monosaccharide binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in outer membrane-bounded periplasmic space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in outer membrane-bounded periplasmic space IDA
Inferred from Direct Assay
more info
PubMed 
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
xylose ABC transporter periplasmic binding protein
NP_418023.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3731131..3732123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418023.1 xylose ABC transporter periplasmic binding protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418023.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P37387
    Conserved Domains (1) summary
    PRK10355
    Location:1330
    xylF; D-xylose ABC transporter substrate-binding protein
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