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gabT 4-aminobutyrate aminotransferase GabT [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948067, updated on 2-May-2024

Summary

Gene symbol
gabT
Gene description
4-aminobutyrate aminotransferase GabT
Primary source
ASAP:ABE-0008760
Locus tag
b2662
See related
ECOCYC:EG10361
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2656
Summary
4-aminobutyrate aminotransferase is the initial enzyme of the 4-aminobutyrate (GABA) degradation pathway . [More information is available at EcoCyc: EG10361].
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Genomic context

Sequence:
NC_000913.3 (2792735..2794015)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene L-2-hydroxyglutarate dehydrogenase Neighboring gene succinate-semialdehyde dehydrogenase (NADP(+)) GabD Neighboring gene 4-aminobutanoate:H(+) symporter Neighboring gene DNA-binding transcriptional repressor GlaR

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
4-aminobutyrate aminotransferase GabT
NP_417148.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2792735..2794015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417148.1 4-aminobutyrate aminotransferase GabT [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417148.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X3JDC1
    Conserved Domains (1) summary
    PRK08088
    Location:1425
    PRK08088; 4-aminobutyrate--2-oxoglutarate transaminase