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dppC dipeptide ABC transporter membrane subunit DppC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948064, updated on 6-May-2021

Summary

Gene symbol
dppC
Gene description
dipeptide ABC transporter membrane subunit DppC
Primary source
ASAP:ABE-0011570
Locus tag
b3542
See related
ECOCYC:EG12626
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3529
Summary
Escherichia coli does not normally use exogeneous heme, but heme can be utilized if a foreign OM heme receptor is expressed in Escherichia coli (Letoffe, 2006). [More information is available at EcoGene: EG12626]. DppC is an integral membrane component of the dipeptide ABC transporter. [More information is available at EcoCyc: EG12626].
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Genomic context

Sequence:
NC_000913.3 (3703859..3704761, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative transporter YhjV Neighboring gene dipeptide ABC transporter ATP binding subunit DppF Neighboring gene dipeptide ABC transporter ATP binding subunit DppD Neighboring gene dipeptide ABC transporter membrane subunit DppB Neighboring gene dipeptide ABC transporter periplasmic binding protein

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables dipeptide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables dipeptide transmembrane transporter activity RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within dipeptide transmembrane transport RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
acts_upstream_of_or_within heme transport IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within peptide transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
dipeptide ABC transporter membrane subunit DppC
NP_417999.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3703859..3704761 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417999.1 dipeptide ABC transporter membrane subunit DppC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417999.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AEG1
    Conserved Domains (1) summary
    PRK10913
    Location:1300
    PRK10913; dipeptide ABC transporter permease DppC
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