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dcrB periplasmic bacteriophage sensitivity protein DcrB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947983, updated on 4-Feb-2024

Summary

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Gene symbol
dcrB
Gene description
periplasmic bacteriophage sensitivity protein DcrB
Primary source
ASAP:ABE-0011342
Locus tag
b3472
See related
ECOCYC:G7767
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3456; yhhR
Summary
DcrB is involved in sensitivity to bacteriophage C6, specifically in the DNA injection upon phage adsorption . [More information is available at EcoCyc: G7767].
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Genomic context

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Sequence:
NC_000913.3 (3609955..3610512)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene sulfur transfer protein TusA Neighboring gene queuosine precursor transporter Neighboring gene putative transporter YhhS Neighboring gene putative transporter YhhT

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli. Pushpker R, et al. Microbiology (Reading), 2022 Dec. PMID 36748554
  2. A synergistic role for two predicted inner membrane proteins of Escherichia coli in cell envelope integrity. Mychack A, et al. Mol Microbiol, 2019 Feb. PMID 30368949
  3. Genetic control of the resistance to phage C1 of Escherichia coli K-12. Likhacheva NA, et al. J Bacteriol, 1996 Sep. PMID 8752353, Free PMC Article
  4. DcrA and dcrB Escherichia coli genes can control DNA injection by phages specific for BtuB and FhuA receptors. Samsonov VV, et al. Res Microbiol, 2002 Dec. PMID 12558182
  5. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli.
    Title: Small multidrug resistance protein EmrE phenotypically associates with OmpW, DcrB and YggM for osmotic stress protection by betaine in Escherichia coli.
  2. Here, the authors show that YciB and DcrB, two small cytoplasmic membrane proteins of previously unknown functions, play an essential synergistic role in maintaining cell envelope integrity of Escherichia coli.
    Title: A synergistic role for two predicted inner membrane proteins of Escherichia coli in cell envelope integrity.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in periplasmic space IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
periplasmic bacteriophage sensitivity protein DcrB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3609955..3610512
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417929.4 periplasmic bacteriophage sensitivity protein DcrB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417929.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7D7DS42
    Conserved Domains (1) summary
    PRK11615
    Location:1 → 185
    PRK11615; hypothetical protein; Provisional
Nucleotide Protein
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Gene LinkOut

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