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hslR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947912, updated on 11-Sep-2024

Summary

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Official Symbol
hslR
Primary source
ECOCYC:G7743
Locus tag
b3400
See related
ASAP:ABE-0011094
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3387; hsp15; yrfH
Summary
Hsp15 is an abundant heat shock protein with DNA and RNA binding activity . [More information is available at EcoCyc: G7743].
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Genomic context

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Sequence:
NC_000913.3 (3529348..3529749)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene inner membrane protein IgaA Neighboring gene purine nucleotidase Neighboring gene molecular chaperone Hsp33 Neighboring gene putative transport protein YhgE

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure of Escherichia coli heat shock protein Hsp15 in complex with the ribosomal 50S subunit bearing peptidyl-tRNA. Safdari HA, et al. Nucleic Acids Res, 2022 Nov 28. PMID 36370110, Free PMC Article
  2. Recycling of aborted ribosomal 50S subunit-nascent chain-tRNA complexes by the heat shock protein Hsp15. Jiang L, et al. J Mol Biol, 2009 Mar 13. PMID 19013177
  3. Structure of Hsp15 reveals a novel RNA-binding motif. Staker BL, et al. EMBO J, 2000 Feb 15. PMID 10675344, Free PMC Article
  4. Hsp15: a ribosome-associated heat shock protein. Korber P, et al. EMBO J, 2000 Feb 15. PMID 10675343, Free PMC Article
  5. A new heat shock protein that binds nucleic acids. Korber P, et al. J Biol Chem, 1999 Jan 1. PMID 9867837

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Structure of Escherichia coli heat shock protein Hsp15 in complex with the ribosomal 50S subunit bearing peptidyl-tRNA.
    Title: Structure of Escherichia coli heat shock protein Hsp15 in complex with the ribosomal 50S subunit bearing peptidyl-tRNA.
  2. N-terminus verified by Edman degradation on complete protein
    Title: A new heat shock protein that binds nucleic acids.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables ribosomal large subunit binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables ribosomal large subunit binding IEA
Inferred from Electronic Annotation
more info
  
enables single-stranded RNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cellular response to heat IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cellular response to heat IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to heat IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
heat shock protein Hsp15

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3529348..3529749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417859.1 heat shock protein Hsp15 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417859.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7TI77
    Conserved Domains (1) summary
    PRK10348
    Location:1 → 133
    PRK10348; ribosome-associated heat shock protein Hsp15; Provisional
Nucleotide Protein
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