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yhfW putative mutase YhfW [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947890, updated on 26-Mar-2025

Summary

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Official Symbol
yhfW
Official Full Name
putative mutase YhfW
Primary source
ECOCYC:G7732
Locus tag
b3380
See related
ASAP:ABE-0011046
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3367
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Genomic context

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Sequence:
NC_000913.3 (3508587..3509813, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YhfT Neighboring gene DUF2620 domain-containing protein YhfU Neighboring gene putative hydrolase Neighboring gene putative PLP-binding protein YhfX Neighboring gene PRD domain-containing protein YhfY Neighboring gene putative DNA-binding transcriptional regulator YhfZ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
  2. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables phosphopentomutase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables phosphopentomutase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in metabolic compound salvage IEA
Inferred from Electronic Annotation
more info
  
involved_in nucleotide metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
putative mutase YhfW

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3508587..3509813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417839.1 putative mutase YhfW [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417839.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6M9X2F1
    Conserved Domains (1) summary
    PRK12383
    Location:1 → 406
    PRK12383; putative mutase; Provisional
Nucleotide Protein
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