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yhfG DUF2559 domain-containing protein YhfG [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947871, updated on 3-Dec-2024

Summary

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Official Symbol
yhfG
Official Full Name
DUF2559 domain-containing protein YhfG
Primary source
ECOCYC:EG12374
Locus tag
b3362
See related
ASAP:ABE-0010989
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3350; ficA
Summary
Repressed during biofilm formation. [More information is available at EcoGene: EG12374].
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Genomic context

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Sequence:
NC_000913.3 (3491453..3491620, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene N-acetylornithine aminotransferase/N-succinyldiaminopimelate aminotransferase Neighboring gene protein YrfJ Neighboring gene aminodeoxychorismate synthase subunit 2 Neighboring gene putative adenosine monophosphate--protein transferase Fic Neighboring gene peptidyl-prolyl cis-trans isomerase A Neighboring gene putative transporter TsgA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromosomal organization and expression of Escherichia coli pabA. Tran PV, et al. J Bacteriol, 1990 Jan. PMID 2403545, Free PMC Article
  2. Nucleotide sequences of fic and fic-1 genes involved in cell filamentation induced by cyclic AMP in Escherichia coli. Kawamukai M, et al. J Bacteriol, 1989 Aug. PMID 2546924, Free PMC Article
  3. Crystal Structure of the Escherichia coli Fic Toxin-Like Protein in Complex with Its Cognate Antitoxin. Stanger FV, et al. PLoS One, 2016. PMID 27657533, Free PMC Article
  4. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
  5. Gene expression in Escherichia coli biofilms. Ren D, et al. Appl Microbiol Biotechnol, 2004 May. PMID 14727089

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
DUF2559 domain-containing protein YhfG

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3491453..3491620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417821.1 DUF2559 domain-containing protein YhfG [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417821.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9APS3
    Conserved Domains (1) summary
    PRK10204
    Location:1 → 55
    PRK10204; hypothetical protein; Provisional
Nucleotide Protein
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