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gspM Type II secretion system protein GspM [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947841, updated on 19-Sep-2024

Summary

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Official Symbol
gspM
Official Full Name
Type II secretion system protein GspM
Primary source
ECOCYC:EG12173
Locus tag
b3334
See related
ASAP:ABE-0010898
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3321; hopZ; pshM
Summary
A divergon is a regulon comprised of two adjacent divergent operons or genes. [More information is available at EcoGene: EG12173]. In Escherichia coli, gspM is a member of an operon of genes (gspC-O) which are not normally expressed but are homologous to those encoding the secreton, or type II secretion machinery in Klebsiella oxytoca and Aeromonase hydrophila, among others . [More information is available at EcoCyc: EG12173].
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Genomic context

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Sequence:
NC_000913.3 (3465082..3465543)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene Type II secretion system protein GspH Neighboring gene Type II secretion system protein GspI Neighboring gene Type II secretion system protein GspJ Neighboring gene Type II secretion system protein GspK Neighboring gene Type II secretion system protein GspL Neighboring gene Type II secretion system prepilin peptidase Neighboring gene bacterioferritin Neighboring gene bacterioferritin-associated ferredoxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conservative region of the genes encoding four adhesins of Helicobacter pylori: cloning, sequence analysis and biological information analysis. Bai Y, et al. Di Yi Jun Yi Da Xue Xue Bao, 2002 Oct. PMID 12377603
  2. Conservation, localization and expression of HopZ, a protein involved in adhesion of Helicobacter pylori. Peck B, et al. Nucleic Acids Res, 1999 Aug 15. PMID 10454640, Free PMC Article
  3. Biology of type II secretion. Sandkvist M. Mol Microbiol, 2001 Apr. PMID 11309111
  4. Escherichia coli contains a set of genes homologous to those involved in protein secretion, DNA uptake and the assembly of type-4 fimbriae in other bacteria. Whitchurch CB, et al. Gene, 1994 Dec 2. PMID 7959070
  5. Type IV-like pili formed by the type II secreton: specificity, composition, bundling, polar localization, and surface presentation of peptides. Vignon G, et al. J Bacteriol, 2003 Jun. PMID 12754241, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in protein secretion by the type II secretion system IEA
Inferred from Electronic Annotation
more info
  
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
part_of type II protein secretion system complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Type II secretion system protein GspM

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3465082..3465543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417793.2 Type II secretion system protein GspM [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417793.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1V2FVM1
    Conserved Domains (1) summary
    pfam04612
    Location:2 → 150
    T2SSM; Type II secretion system (T2SS), protein M
Nucleotide Protein
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