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rpsJ 30S ribosomal subunit protein S10 [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947816, updated on 6-May-2021

Summary

Gene symbol
rpsJ
Gene description
30S ribosomal subunit protein S10
Primary source
ASAP:ABE-0010862
Locus tag
b3321
See related
ECOCYC:EG10909
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3308; nusE
Summary
The S10 protein (NusE) is a component of the 30S subunit of the ribosome and, in a complex with NusB, plays a role in transcription antitermination. [More information is available at EcoCyc: EG10909].
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Genomic context

Sequence:
NC_000913.3 (3452959..3453270, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 50S ribosomal subunit protein L23 Neighboring gene 50S ribosomal subunit protein L4 Neighboring gene 50S ribosomal subunit protein L3 Neighboring gene putative general secretion pathway protein B Neighboring gene Type II secretion system protein GspA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 
enables transcription antitermination factor activity, RNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within transcription antitermination IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
part_of cytosolic small ribosomal subunit IDA
Inferred from Direct Assay
more info
PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 
part_of small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
30S ribosomal subunit protein S10

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3452959..3453270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417780.1 30S ribosomal subunit protein S10 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417780.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0A7R5
    Conserved Domains (1) summary
    PRK00596
    Location:1102
    rpsJ; 30S ribosomal protein S10; Reviewed
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