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rpsC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947814, updated on 11-Sep-2024

Summary

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Official Symbol
rpsC
Primary source
ECOCYC:EG10902
Locus tag
b3314
See related
ASAP:ABE-0010848
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3301
Summary
The S3 protein, a component of the small subunit of the ribosome, is surface-accessible and located on the head of the 30S subunit . [More information is available at EcoCyc: EG10902].
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Genomic context

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Sequence:
NC_000913.3 (3449182..3449883, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 30S ribosomal subunit protein S17 Neighboring gene 50S ribosomal subunit protein L29 Neighboring gene 50S ribosomal subunit protein L16 Neighboring gene 50S ribosomal subunit protein L22 Neighboring gene 30S ribosomal subunit protein S19

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Flexibility of the nascent polypeptide chain within the ribosome--contacts from the peptide N-terminus to a specific region of the 30S subunit. Choi KM, et al. Eur J Biochem, 1998 Jul 15. PMID 9716382
  2. Comparative electron microscopic study on the location of ribosomal proteins S3 and S7 on the surface of the E. coli 30S subunit using monoclonal and conventional antibody. Breitenreuter G, et al. Mol Gen Genet, 1984. PMID 6394951
  3. Chemical modification in situ of Escherichia coli 30 S ribosomal proteins by the site-specific reagent pyridoxal phosphate. Inactivation of the aminoacyl-tRNA and mRNA binding sites. Ohsawa H, et al. J Biol Chem, 1983 Jan 10. PMID 6336745
  4. The primary structure of protein S3 from the small ribosomal subunit of Escherichia coli. Brauer D, et al. FEBS Lett, 1979 Oct 15. PMID 387449
  5. mRNA helicase activity of the ribosome. Takyar S, et al. Cell, 2005 Jan 14. PMID 15652481

See all (37) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on mature peptide
    Title: The primary structure of protein S3 from the small ribosomal subunit of Escherichia coli.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in ribosomal small subunit assembly IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic small ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
part_of cytosolic small ribosomal subunit IPI
Inferred from Physical Interaction
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
30S ribosomal subunit protein S3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3449182..3449883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417773.1 30S ribosomal subunit protein S3 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417773.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9APH2
    Conserved Domains (1) summary
    PRK00310
    Location:1 → 232
    rpsC; 30S ribosomal protein S3; Reviewed
Nucleotide Protein
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Other Literature Sources
Molecular Biology Databases
Research Materials