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rpsQ 30S ribosomal subunit protein S17 [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947808, updated on 6-May-2021

Summary

Gene symbol
rpsQ
Gene description
30S ribosomal subunit protein S17
Primary source
ASAP:ABE-0010840
Locus tag
b3311
See related
ECOCYC:EG10916
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3298; neaA
Summary
rpsQ can be deleted, but null mutants grow slowly and express kanamycin resistance weakly (Bubunenko, 2007), which may explain why a deletion was not isolated by Baba (2006), leading to its misclassification as an essential gene. [More information is available at EcoGene: EG10916]. The S17 protein is a component of the 30S subunit of the ribosome. [More information is available at EcoCyc: EG10916].
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Genomic context

Sequence:
NC_000913.3 (3448314..3448568, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 50S ribosomal subunit protein L24 Neighboring gene 50S ribosomal subunit protein L14 Neighboring gene 50S ribosomal subunit protein L29 Neighboring gene 50S ribosomal subunit protein L16 Neighboring gene 30S ribosomal subunit protein S3

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables rRNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 
enables small ribosomal subunit rRNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within response to antibiotic IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within response to antibiotic IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within ribosomal small subunit assembly IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of cytosolic small ribosomal subunit IDA
Inferred from Direct Assay
more info
PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
30S ribosomal subunit protein S17

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3448314..3448568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417770.1 30S ribosomal subunit protein S17 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417770.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AG63
    Conserved Domains (1) summary
    PRK05610
    Location:183
    rpsQ; 30S ribosomal protein S17; Reviewed
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