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gltF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947746, updated on 11-Sep-2024

Summary

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Official Symbol
gltF
Primary source
ECOCYC:EG11514
Locus tag
b3214
See related
ASAP:ABE-0010549
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3204; ossB
Summary
Although the GltF protein was overproduced using foreign translation signals, the detection of a signal peptide cleavage verifies the mature protein N-terminus. [More information is available at EcoGene: EG11514]. gltF belongs to an operon with genes for the large and small subunits of glutamate synthase, gltB and gltD . [More information is available at EcoCyc: EG11514].
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Genomic context

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Sequence:
NC_000913.3 (3361176..3361940)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene glutamate synthase subunit GltB Neighboring gene glutamate synthase subunit GltD Neighboring gene putative fimbrial chaperone YhcA Neighboring gene putative fimbrial usher protein YhcD Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Activation from a distance: roles of Lrp and integration host factor in transcriptional activation of gltBDF. Paul L, et al. J Bacteriol, 2001 Jul. PMID 11395454, Free PMC Article
  2. Characterization of the gltF gene product of Escherichia coli. Grassl G, et al. FEMS Microbiol Lett, 1999 Oct 1. PMID 10481090
  3. The leucine-responsive regulatory protein, a global regulator of metabolism in Escherichia coli. Calvo JM, et al. Microbiol Rev, 1994 Sep. PMID 7968922, Free PMC Article
  4. Roles of glutamate synthase, gltBD, and gltF in nitrogen metabolism of Escherichia coli and Klebsiella aerogenes. Goss TJ, et al. J Bacteriol, 2001 Nov. PMID 11673431, Free PMC Article
  5. gltBDF operon of Escherichia coli. Castaño I, et al. J Bacteriol, 1988 Feb. PMID 2448295, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on mature peptide
    Title: Characterization of the gltF gene product of Escherichia coli.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in outer membrane-bounded periplasmic space IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
periplasmic protein GltF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3361176..3361940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417681.1 periplasmic protein GltF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417681.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A377DKR7
    Conserved Domains (1) summary
    pfam06551
    Location:33 → 146
    DUF1120; Protein of unknown function (DUF1120)
Nucleotide Protein
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