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hpf ribosome hibernation-promoting factor [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947718, updated on 6-May-2021

Summary

Gene symbol
hpf
Gene description
ribosome hibernation-promoting factor
Primary source
ASAP:ABE-0010516
Locus tag
b3203
See related
ECOCYC:EG11681
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3192; yhbH
Summary
Homologous to RpoN modulators. [More information is available at EcoGene: EG11681]. YhbH binds to 100S ribosome dimers while YfiA binds to 70S ribosomes at stationary phase . [More information is available at EcoCyc: EG11681].
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Genomic context

Sequence:
NC_000913.3 (3346173..3346460)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene lipopolysaccharide transport system ATP binding protein LptB Neighboring gene RNA polymerase, sigma 54 (sigma N) factor Neighboring gene phosphotransferase system enzyme IIA(Ntr) Neighboring gene RNase adaptor protein RapZ Neighboring gene phosphorelay protein NPr

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables ribosomal small subunit binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables ribosomal small subunit binding IDA
Inferred from Direct Assay
more info
PubMed 
enables ribosome binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables ribosome binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
ribosome hibernation-promoting factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3346173..3346460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417670.1 ribosome hibernation-promoting factor [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417670.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AFX0
    Conserved Domains (1) summary
    PRK10470
    Location:195
    PRK10470; ribosome hibernation promoting factor
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