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kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947717, updated on 19-Sep-2024

Summary

Official Symbol
kdsC
Official Full Name
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Primary source
ECOCYC:G7663
Locus tag
b3198
See related
ASAP:ABE-0010506
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3187; yrbI; yrbJ
Summary
YrbI is renamed as KdsC (personal comm., R.W. [More information is available at EcoGene: EG12804]. 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase is specific for the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate. [More information is available at EcoCyc: G7663].
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Genomic context

Sequence:
NC_000913.3 (3342273..3342839)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative transport protein YrbG Neighboring gene D-arabinose 5-phosphate isomerase KdsD Neighboring gene lipopolysaccharide transport system protein LptC Neighboring gene lipopolysaccharide transport system protein LptA Neighboring gene lipopolysaccharide transport system ATP binding protein LptB

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 3-deoxy-manno-octulosonate-8-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in lipopolysaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
NP_417665.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3342273..3342839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417665.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417665.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A827QNP5
    Conserved Domains (1) summary
    PRK09484
    Location:6188
    PRK09484; 3-deoxy-manno-octulosonate-8-phosphatase KdsC