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agaV [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947648, updated on 11-Sep-2024

Summary

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Official Symbol
agaV
Primary source
ECOCYC:G7632
Locus tag
b3133
See related
ASAP:ABE-0010297
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3121; yhaY
Summary
agaV encodes Enzyme IIBAga of the N-acetyl-galactosamine (Aga) phosphotransferase system (PTS). agaW encodes Enzyme IICAga of the Aga PTS. [More information is available at EcoCyc: G7632].
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Genomic context

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Sequence:
NC_000913.3 (3280217..3280690)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor AgaR Neighboring gene putative tagatose-1,6-bisphosphate aldolase 1 chaperone Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Application of AgaR repressor and dominant repressor variants for verification of a gene cluster involved in N-acetylgalactosamine metabolism in Escherichia coli K-12. Ray WK, et al. Mol Microbiol, 2004 Feb. PMID 14731281
  2. Novel phosphotransferase genes revealed by bacterial genome sequencing: a gene cluster encoding a putative N-acetylgalactosamine metabolic pathway in Escherichia coli. Reizer J, et al. Microbiology (Reading), 1996 Feb. PMID 8932697
  3. Pathways for the utilization of N-acetyl-galactosamine and galactosamine in Escherichia coli. Brinkkötter A, et al. Mol Microbiol, 2000 Jul. PMID 10931310
  4. Phosphoenolpyruvate:carbohydrate phosphotransferase systems of bacteria. Postma PW, et al. Microbiol Rev, 1993 Sep. PMID 8246840, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in phosphoenolpyruvate-dependent sugar phosphotransferase system IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
N-acetyl-D-galactosamine specific PTS enzyme IIB component

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3280217..3280690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417602.4 N-acetyl-D-galactosamine specific PTS enzyme IIB component [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417602.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376WSD4
    Conserved Domains (1) summary
    PRK11425
    Location:1 → 157
    PRK11425; PTS N-acetylgalactosamine transporter subunit IIB
Nucleotide Protein
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