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agaA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947646, updated on 11-Sep-2024

Summary

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Official Symbol
agaA
Primary source
ECOCYC:EG12766
Locus tag
b3135
See related
ASAP:ABE-0010302
Gene type
pseudo
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3123; yraA
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Genomic context

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Sequence:
NC_000913.3 (3281122..3281625)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene N-acetyl-D-galactosamine specific PTS enzyme IIB component Neighboring gene pseudo Neighboring gene putative galactosamine-6-phosphate deaminase/isomerase Neighboring gene tagatose-1,6-bisphosphate aldolase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic analysis of the roles of agaA, agaI, and agaS genes in the N-acetyl-D-galactosamine and D-galactosamine catabolic pathways in Escherichia coli strains O157:H7 and C. Hu Z, et al. BMC Microbiol, 2013 May 1. PMID 23634833, Free PMC Article
  2. A systematic investigation identifies a significant number of probable pseudogenes in the Escherichia coli genome. Homma K, et al. Gene, 2002 Jul 10. PMID 12234664
  3. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
  4. Novel phosphotransferase genes revealed by bacterial genome sequencing: a gene cluster encoding a putative N-acetylgalactosamine metabolic pathway in Escherichia coli. Reizer J, et al. Microbiology (Reading), 1996 Feb. PMID 8932697
  5. Pathways for the utilization of N-acetyl-galactosamine and galactosamine in Escherichia coli. Brinkkötter A, et al. Mol Microbiol, 2000 Jul. PMID 10931310

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-acetyl-D-galactosamine utilization was not affected in DeltaagaA mutants because nagA was expressed and substituted for agaA.
    Title: Genetic analysis of the roles of agaA, agaI, and agaS genes in the N-acetyl-D-galactosamine and D-galactosamine catabolic pathways in Escherichia coli strains O157:H7 and C.
Submit: New GeneRIF Correction

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