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garK glycerate 2-kinase 1 [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947632, updated on 9-Mar-2022

Summary

Gene symbol
garK
Gene description
glycerate 2-kinase 1
Primary source
ASAP:ABE-0010271
Locus tag
b3124
See related
ECOCYC:EG11175
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3112; yhaD
Summary
Glycerate kinase I (GKI), encoded by garK, catalyzes the formation of 2-phosphoglycerate from D-glycerate . [More information is available at EcoCyc: EG11175].
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Genomic context

Sequence:
NC_000913.3 (3270625..3271770, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YhaC Neighboring gene ncRNA Neighboring gene tartronate semialdehyde reductase Neighboring gene alpha-dehydro-beta-deoxy-D-glucarate aldolase

Pathways from PubChem

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables glycerate 2-kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables glycerate 2-kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables glycerate 2-kinase activity IGI
Inferred from Genetic Interaction
more info
PubMed 
enables glycerate kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within D-glucarate catabolic process IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within galactarate catabolic process IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in organic acid phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in phosphorylation IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
glycerate 2-kinase 1
NP_417593.4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3270625..3271770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417593.4 glycerate 2-kinase 1 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417593.4

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P23524
    Conserved Domains (1) summary
    PRK10342
    Location:1381
    PRK10342; glycerate kinase I; Provisional