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garK glycerate 2-kinase 1 [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947632, updated on 19-Sep-2024

Summary

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Official Symbol
garK
Official Full Name
glycerate 2-kinase 1
Primary source
ECOCYC:EG11175
Locus tag
b3124
See related
ASAP:ABE-0010271
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3112; yhaD
Summary
Glycerate kinase I (GKI), encoded by garK, catalyzes the formation of 2-phosphoglycerate from D-glycerate . [More information is available at EcoCyc: EG11175].
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Genomic context

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Sequence:
NC_000913.3 (3270625..3271770, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YhaC Neighboring gene ncRNA Neighboring gene tartronate semialdehyde reductase Neighboring gene alpha-dehydro-beta-deoxy-D-glucarate aldolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Two forms of D-glycerate kinase in Escherichia coli. Ornston MK, et al. J Bacteriol, 1969 Mar. PMID 4887503, Free PMC Article
  2. Precise mapping of the rnpB gene encoding the RNA component of RNase P in Escherichia coli K-12. Komine Y, et al. J Bacteriol, 1991 Mar. PMID 1705543, Free PMC Article
  3. Processing of the precursor to the catalytic RNA subunit of RNase P from Escherichia coli. Lundberg U, et al. RNA, 1995 May. PMID 7489504, Free PMC Article
  4. A common regulator for the operons encoding the enzymes involved in D-galactarate, D-glucarate, and D-glycerate utilization in Escherichia coli. Monterrubio R, et al. J Bacteriol, 2000 May. PMID 10762278, Free PMC Article
  5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables glycerate 2-kinase activity EXP
Inferred from Experiment
more info
 PubMed 
enables glycerate 2-kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables glycerate 2-kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycerate kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within D-glucarate catabolic process IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within galactarate catabolic process IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in organic acid phosphorylation IEA
Inferred from Electronic Annotation
more info
  
involved_in phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
glycerate 2-kinase 1
NP_417593.4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3270625..3271770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417593.4 glycerate 2-kinase 1 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417593.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T6PTW0
    Conserved Domains (1) summary
    PRK10342
    Location:1 → 381
    PRK10342; glycerate kinase I; Provisional
Nucleotide Protein
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