U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ttdT L-tartrate:succinate antiporter [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947576, updated on 17-Dec-2024
Official Symbol
ttdT
Official Full Name
L-tartrate:succinate antiporter
Primary source
ECOCYC:EG12393
Locus tag
b3063
See related
ASAP:ABE-0010056
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3053; ygjC; ygjE
Summary
TtdT does not transport D-tartrate and can uptake succinate, although excretion of succinate is favored. [More information is available at EcoGene: EG12393]. TtdT is a putative tartrate/succinate antiporter belonging to the DASS family of di- and tri-carboxylic acid transporters. [More information is available at EcoCyc: EG12393].
NEW
Try the new Gene table
Try the new Transcript table
Sequence:
NC_000913.3 (3208024..3209487)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional activator Dan Neighboring gene L(+)-tartrate dehydratase subunit alpha Neighboring gene L(+)-tartrate dehydratase subunit beta Neighboring gene N(6)-L-threonylcarbamoyladenine synthase, TsaD subunit Neighboring gene 30S ribosomal subunit protein S21

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Identification of the L-tartrate dehydratase genes (ttdA and ttdB) of Escherichia coli and evolutionary relationship with the class I fumarase genes. Reaney SK, et al. J Gen Microbiol, 1993 Jul. PMID 8371115
  2. Possible new genes as revealed by molecular analysis of a 5-kb Escherichia coli chromosomal region 5' to the rpsU-dnaG-rpoD macromolecular-synthesis operon. Nesin M, et al. Gene, 1987. PMID 3297921
  3. The L-tartrate/succinate antiporter TtdT (YgjE) of L-tartrate fermentation in Escherichia coli. Kim OB, et al. J Bacteriol, 2007 Mar. PMID 17172328, Free PMC Article
  4. The Escherichia coli citrate carrier CitT: a member of a novel eubacterial transporter family related to the 2-oxoglutarate/malate translocator from spinach chloroplasts. Pos KM, et al. J Bacteriol, 1998 Aug. PMID 9696764, Free PMC Article
  5. Functional identification of ygiP as a positive regulator of the ttdA-ttdB-ygjE operon. Oshima T, et al. Microbiology (Reading), 2006 Jul. PMID 16804186

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
  
enables tartrate:succinate antiporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in succinate transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in tartrate transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
L-tartrate:succinate antiporter

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3208024..3209487
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417535.1 L-tartrate:succinate antiporter [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417535.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7E8R2
    Conserved Domains (1) summary
    pfam00939
    Location:4 → 487
    Na_sulph_symp; Sodium:sulfate symporter transmembrane region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.