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ybfB uncharacterized protein YbfB [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947566, updated on 6-May-2021

Summary

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Gene symbol
ybfB
Gene description
uncharacterized protein YbfB
Primary source
ASAP:ABE-0002398
Locus tag
b0702
See related
ECOCYC:EG11522
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0690
Summary
YbfB has no homologs, but does have a good RBS. [More information is available at EcoGene: EG11522].
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Genomic context

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Sequence:
NC_000913.3 (733776..734102)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2517 domain-containing protein YbfA Neighboring gene rhs element protein RhsC Neighboring gene pseudo Neighboring gene uncharacterized protein YbfC Neighboring gene inactive transposase YbfQ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and evolution of dual-topology membrane proteins. Rapp M, et al. Nat Struct Mol Biol, 2006 Feb. PMID 16429150
  2. Rhs elements of Escherichia coli K-12: complex composites of shared and unique components that have different evolutionary histories. Zhao S, et al. J Bacteriol, 1993 May. PMID 8387990, Free PMC Article
  3. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
  4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein YbfB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    733776..734102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415230.1 uncharacterized protein YbfB [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415230.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0AAU5
Nucleotide Protein
Heading Accession and Version

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