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yciG [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947489, updated on 11-Sep-2024

Summary

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Official Symbol
yciG
Primary source
ECOCYC:EG11127
Locus tag
b1259
See related
ASAP:ABE-0004229
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1253
Summary
ymdF and yciG are paralogs. [More information is available at EcoGene: EG11127]. Transcription of yciG is induced by sulfometuron methyl, an herbicide that inhibits acetolactate synthase, by salicylate , and by high salt conditions . [More information is available at EcoCyc: EG11127].
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Genomic context

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Sequence:
NC_000913.3 (1315856..1316035, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF892 domain-containing protein YciE Neighboring gene DUF892 domain-containing protein YciF Neighboring gene tryptophan synthase subunit alpha Neighboring gene tryptophan synthase subunit beta Neighboring gene fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Constricted flux through the branched-chain amino acid biosynthetic enzyme acetolactate synthase triggers elevated expression of genes regulated by rpoS and internal acidification. Van Dyk TK, et al. J Bacteriol, 1998 Feb. PMID 9473030, Free PMC Article
  2. Molecular evolution of the Escherichia coli chromosome. I. Analysis of structure and natural variation in a previously uncharacterized region between trp and tonB. Stoltzfus A, et al. Genetics, 1988 Oct. PMID 3058546, Free PMC Article
  3. Function of the Escherichia coli nucleoid protein, H-NS: molecular analysis of a subset of proteins whose expression is enhanced in a hns deletion mutant. Yoshida T, et al. Mol Gen Genet, 1993 Feb. PMID 8455549
  4. Climbing the protein ladder. Dovichi NJ. Nat Biotechnol, 2004 Oct. PMID 15470461
  5. Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. Weber H, et al. J Bacteriol, 2005 Mar. PMID 15716429, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within bacterial-type flagellum-dependent swarming motility IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
stress-induced bacterial acidophilic repeat motifs-containing protein YciG

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1315856..1316035 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415775.4 stress-induced bacterial acidophilic repeat motifs-containing protein YciG [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415775.4

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P21361
    Conserved Domains (1) summary
    COG3729
    Location:1 → 43
    GsiB; General stress protein YciG, contains tandem KGG domains [General function prediction only]
Nucleotide Protein
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