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glcC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947466, updated on 11-Sep-2024

Summary

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Official Symbol
glcC
Primary source
ECOCYC:G7546
Locus tag
b2980
See related
ASAP:ABE-0009777
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2975; yghN
Summary
GlcC is a GntR-type DNA-binding transcriptional regulator. [More information is available at EcoGene: EG12998].
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Genomic context

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Sequence:
NC_000913.3 (3128272..3129036)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene glycolate dehydrogenase, putative FAD-binding subunit Neighboring gene glycolate dehydrogenase, putative FAD-linked subunit Neighboring gene putative DNA-binding transcriptional regulator YghO Neighboring gene IS5 family transposase and trans-activator Neighboring gene putative transport protein YghQ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NetPhosBac - a predictor for Ser/Thr phosphorylation sites in bacterial proteins. Miller ML, et al. Proteomics, 2009 Jan. PMID 19053140
  2. Cross-induction of glc and ace operons of Escherichia coli attributable to pathway intersection. Characterization of the glc promoter. Pellicer MT, et al. J Biol Chem, 1999 Jan 15. PMID 9880556
  3. glc locus of Escherichia coli: characterization of genes encoding the subunits of glycolate oxidase and the glc regulator protein. Pellicer MT, et al. J Bacteriol, 1996 Apr. PMID 8606183, Free PMC Article
  4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  5. Subdivision of the helix-turn-helix GntR family of bacterial regulators in the FadR, HutC, MocR, and YtrA subfamilies. Rigali S, et al. J Biol Chem, 2002 Apr 12. PMID 11756427

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DNA-binding transcriptional dual regulator GlcC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3128272..3129036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417454.1 DNA-binding transcriptional dual regulator GlcC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417454.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1N0Q8
    Conserved Domains (1) summary
    PRK09990
    Location:1 → 250
    PRK09990; DNA-binding transcriptional regulator GlcC; Provisional
Nucleotide Protein
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