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speC constitutive ornithine decarboxylase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947457, updated on 6-May-2021

Summary

Gene symbol
speC
Gene description
constitutive ornithine decarboxylase
Primary source
ASAP:ABE-0009730
Locus tag
b2965
See related
ECOCYC:EG10961
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2960
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Genomic context

Sequence:
NC_000913.3 (3107020..3109155, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene membrane-bound lytic murein transglycosylase C Neighboring gene nucleoside:H(+) symporter NupG Neighboring gene protein YqgH Neighboring gene DUF554 domain-containing protein YqgA

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables carboxy-lyase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables carboxy-lyase activity IEA
Inferred from Electronic Annotation
more info
 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 
enables ornithine decarboxylase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables ornithine decarboxylase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables ornithine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 
enables pyridoxal phosphate binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables pyridoxal phosphate binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
constitutive ornithine decarboxylase
NP_417440.4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3107020..3109155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417440.4 constitutive ornithine decarboxylase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417440.4

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P21169
    Conserved Domains (1) summary
    PRK13578
    Location:1711
    PRK13578; ornithine decarboxylase; Provisional
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