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argK [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947412, updated on 11-Sep-2024

Summary

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Official Symbol
argK
Primary source
ECOCYC:EG11445
Locus tag
b2918
See related
ASAP:ABE-0009579
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2914; ygfD
Summary
The role of ArgK in arginine transport needs to be reexamined. [More information is available at EcoGene: EG11445]. YgfD is a member of the G3E family of P-loop GTPases . [More information is available at EcoCyc: EG11445].
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Genomic context

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Sequence:
NC_000913.3 (3062987..3063982)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene DNA-binding transcriptional dual regulator ArgP Neighboring gene methylmalonyl-CoA mutase Neighboring gene methylmalonyl-CoA decarboxylase Neighboring gene propionyl-CoA:succinate CoA transferase Neighboring gene putative DNA-binding transcriptional regulator YgfI

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phosphorylation of the periplasmic binding protein in two transport systems for arginine incorporation in Escherichia coli K-12 is unrelated to the function of the transport system. Celis RT, et al. J Bacteriol, 1998 Sep. PMID 9733684, Free PMC Article
  2. Phosphorylation in vivo and in vitro of the arginine-ornithine periplasmic transport protein of Escherichia coli. Celis RT. Eur J Biochem, 1984 Dec 3. PMID 6389134
  3. Sleeping beauty mutase (sbm) is expressed and interacts with ygfd in Escherichia coli. Froese DS, et al. Microbiol Res, 2009. PMID 18950999, Free PMC Article
  4. MeaB is a component of the methylmalonyl-CoA mutase complex required for protection of the enzyme from inactivation. Korotkova N, et al. J Biol Chem, 2004 Apr 2. PMID 14734568
  5. Physical map location of the new Escherichia coli gene sbm. Roy I, et al. J Bacteriol, 1992 Sep. PMID 1355087, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Sbm is expressed and interacts with ygfD in Escherichia coli.
    Title: Sleeping beauty mutase (sbm) is expressed and interacts with ygfd in Escherichia coli.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTPase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
methylmalonyl-CoA mutase-interacting GTPase YgfD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3062987..3063982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417393.1 methylmalonyl-CoA mutase-interacting GTPase YgfD [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417393.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3W4K241, A0A8T5YBQ1
    Conserved Domains (1) summary
    PRK09435
    Location:1 → 330
    PRK09435; methylmalonyl Co-A mutase-associated GTPase MeaB
Nucleotide Protein
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