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ygbA protein YgbA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947187, updated on 3-Dec-2024
Official Symbol
ygbA
Official Full Name
protein YgbA
Primary source
ECOCYC:EG11287
Locus tag
b2732
See related
ASAP:ABE-0008973
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2727
Summary
NsrR nitrite-sensing regulon. [More information is available at EcoGene: EG11287]. Expression of ygbA is normally upregulated by nitrosative stress . [More information is available at EcoCyc: EG11287].
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Sequence:
NC_000913.3 (2856453..2856806, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene Fe-(CN)2CO cofactor assembly scaffold protein HypD Neighboring gene carbamoyl dehydratase HypE Neighboring gene DNA-binding transcriptional activator FhlA Neighboring gene DNA mismatch repair protein MutS Neighboring gene phosphoprotein phosphatase 2

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The Escherichia coli fdv gene probably encodes mutS and is located at minute 58.8 adjacent to the hyc-hyp gene cluster. Schlensog V, et al. J Bacteriol, 1991 Dec. PMID 1938937, Free PMC Article
  2. Prominent roles of the NorR and Fur regulators in the Escherichia coli transcriptional response to reactive nitrogen species. Mukhopadhyay P, et al. Proc Natl Acad Sci U S A, 2004 Jan 20. PMID 14718666, Free PMC Article
  3. Genome-wide identification of binding sites for the nitric oxide-sensitive transcriptional regulator NsrR. Efromovich S, et al. Methods Enzymol, 2008. PMID 18433631
  4. Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks. Rodionov DA, et al. PLoS Comput Biol, 2005 Oct. PMID 16261196, Free PMC Article
  5. The yjeB (nsrR) gene of Escherichia coli encodes a nitric oxide-sensitive transcriptional regulator. Bodenmiller DM, et al. J Bacteriol, 2006 Feb. PMID 16428390, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
protein YgbA

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2856453..2856806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417212.1 protein YgbA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417212.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376UG06
    Conserved Domains (1) summary
    pfam11756
    Location:4 → 108
    YgbA_NO; Nitrous oxide-stimulated promoter
Nucleotide Protein
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