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yqaE [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947138, updated on 11-Sep-2024

Summary

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Official Symbol
yqaE
Primary source
ECOCYC:G7396
Locus tag
b2666
See related
ASAP:ABE-0008770
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2660
Summary
YqaE is regulated by cyaR sRNA post-transcriptionally (De Lay, 2009). [More information is available at EcoGene: EG14313]. YqaE is a predicted membrane protein of unknown function. [More information is available at EcoCyc: G7396].
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Genomic context

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Sequence:
NC_000913.3 (2796870..2797028, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor GlaR Neighboring gene K(+) binding protein Neighboring gene putative DNA-binding transcriptional regulator YgaV Neighboring gene thiosulfate sulfurtransferase YgaP

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Escherichia coli Cpx envelope stress response regulates genes of diverse function that impact antibiotic resistance and membrane integrity. Raivio TL, et al. J Bacteriol, 2013 Jun. PMID 23564175, Free PMC Article
  2. The Cpx envelope stress response regulates and is regulated by small noncoding RNAs. Vogt SL, et al. J Bacteriol, 2014 Dec. PMID 25246476, Free PMC Article
  3. The Crp-activated small noncoding regulatory RNA CyaR (RyeE) links nutritional status to group behavior. De Lay N, et al. J Bacteriol, 2009 Jan. PMID 18978044, Free PMC Article
  4. Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. Weber H, et al. J Bacteriol, 2005 Mar. PMID 15716429, Free PMC Article
  5. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within response to antibiotic IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Pmp3 family protein YqaE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2796870..2797028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417152.1 Pmp3 family protein YqaE [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417152.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376TTW2
    Conserved Domains (1) summary
    COG0401
    Location:1 → 52
    YqaE; Uncharacterized membrane protein YqaE, homolog of Blt101, UPF0057 family [Function unknown]
Nucleotide Protein
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