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abpA anti-bacteriophage protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947110, updated on 27-Aug-2023

Summary

Gene symbol
abpA
Gene description
anti-bacteriophage protein
Primary source
ASAP:ABE-0008650
Locus tag
b2628
See related
ECOCYC:G7363
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2624; yfjL
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Genomic context

Sequence:
NC_000913.3 (2763537..2765153, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF3987 domain-containing protein YfjI Neighboring gene protein YfjJ Neighboring gene putative helicase YfjK Neighboring gene protein YfjM Neighboring gene RNase LS, toxin of the RnlAB toxin-antitoxin system Neighboring gene antitoxin RnlB

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables nuclease activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within defense response to virus IMP
Inferred from Mutant Phenotype
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2763537..2765153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417117.1 anti-bacteriophage protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417117.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P52127
    Conserved Domains (2) summary
    pfam08878
    Location:294519
    DUF1837; Domain of unknown function (DUF1837)
    pfam14130
    Location:4215
    DUF4297; Domain of unknown function (DUF4297)