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rpsP 30S ribosomal subunit protein S16 [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947103, updated on 2-May-2024

Summary

Gene symbol
rpsP
Gene description
30S ribosomal subunit protein S16
Primary source
ASAP:ABE-0008583
Locus tag
b2609
See related
ECOCYC:EG10915
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2606
Summary
The S16 protein is a component of the 30S subunit of the ribosome and is essential for viability . [More information is available at EcoCyc: EG10915].
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Genomic context

Sequence:
NC_000913.3 (2745937..2746185, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA m(1)G37 methyltransferase Neighboring gene ribosome maturation factor RimM Neighboring gene signal recognition particle protein component Neighboring gene cytochrome c assembly family protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA endonuclease activity IDA
Inferred from Direct Assay
more info
PubMed 
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 
enables four-way junction DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in DNA metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in cytoplasmic translation NAS
Non-traceable Author Statement
more info
PubMed 
acts_upstream_of_or_within ribosomal small subunit assembly IDA
Inferred from Direct Assay
more info
PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
part_of cytosolic small ribosomal subunit IDA
Inferred from Direct Assay
more info
PubMed 
part_of cytosolic small ribosomal subunit IPI
Inferred from Physical Interaction
more info
PubMed 
located_in intracellular organelle IEA
Inferred from Electronic Annotation
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 
part_of small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
30S ribosomal subunit protein S16

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2745937..2746185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417100.1 30S ribosomal subunit protein S16 [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417100.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9AT70
    Conserved Domains (1) summary
    PRK00040
    Location:175
    rpsP; 30S ribosomal protein S16; Reviewed