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napA periplasmic nitrate reductase subunit NapA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947093, updated on 6-Jun-2024

Summary

Gene symbol
napA
Gene description
periplasmic nitrate reductase subunit NapA
Primary source
ASAP:ABE-0007289
Locus tag
b2206
See related
ECOCYC:EG12067
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2198; yojC; yojD; yojE
Summary
Verified Tat substrate: [More information is available at EcoGene: EG12067]. The napA gene encodes the periplasmic nitrate reductase molybdoprotein with an Fe-S center. [More information is available at EcoCyc: EG12067].
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Genomic context

Sequence:
NC_000913.3 (2300267..2302753, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene periplasmic nitrate reductase cytochrome c550 protein Neighboring gene ferredoxin-type protein NapH Neighboring gene ferredoxin-type protein NapG Neighboring gene NapA signal peptide-binding chaperone NapD Neighboring gene ferredoxin-type protein Neighboring gene uncharacterized protein YojO

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IDA
Inferred from Direct Assay
more info
PubMed 
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables molybdenum ion binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables molybdenum ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables molybdenum ion binding IEA
Inferred from Electronic Annotation
more info
 
enables molybdopterin cofactor binding IEA
Inferred from Electronic Annotation
more info
 
enables nitrate reductase (cytochrome) activity IEA
Inferred from Electronic Annotation
more info
 
enables nitrate reductase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nitrate reductase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables nitrate reductase activity IEA
Inferred from Electronic Annotation
more info
 
enables nitrate reductase activity IGI
Inferred from Genetic Interaction
more info
PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in Mo-molybdopterin cofactor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within anaerobic respiration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in anaerobic respiration NAS
Non-traceable Author Statement
more info
PubMed 
involved_in cellular respiration IEA
Inferred from Electronic Annotation
more info
 
involved_in nitrate assimilation IEA
Inferred from Electronic Annotation
more info
 
involved_in nitrate assimilation NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
part_of nitrate reductase complex IPI
Inferred from Physical Interaction
more info
PubMed 
located_in outer membrane-bounded periplasmic space IDA
Inferred from Direct Assay
more info
PubMed 
part_of oxidoreductase complex IEA
Inferred from Electronic Annotation
more info
 
located_in periplasmic space IDA
Inferred from Direct Assay
more info
PubMed 
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
periplasmic nitrate reductase subunit NapA
NP_416710.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2300267..2302753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416710.1 periplasmic nitrate reductase subunit NapA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416710.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7ED94, A0A8S7KAC4
    Conserved Domains (1) summary
    PRK13532
    Location:1828
    PRK13532; nitrate reductase catalytic subunit NapA