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yaiS [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946967, updated on 11-Sep-2024

Summary

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Official Symbol
yaiS
Primary source
ECOCYC:G6216
Locus tag
b0364
See related
ASAP:ABE-0001249
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0361
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Genomic context

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Sequence:
NC_000913.3 (384059..384616, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene IS2 element protein InsA Neighboring gene IS2 element protein Neighboring gene putative glucosyltransferase Neighboring gene protein YkiC Neighboring gene taurine ABC transporter periplasmic binding protein Neighboring gene taurine ABC transporter ATP binding subunit Neighboring gene taurine ABC transporter membrane subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks. Rooney JP, et al. Genomics, 2009 Jan. PMID 18824089, Free PMC Article
  2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
putative deacetylase YaiS

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    384059..384616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414898.4 putative deacetylase YaiS [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414898.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W1VZS4
    Conserved Domains (1) summary
    COG2120
    Location:19 → 185
    LmbE; N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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