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fecD ferric citrate ABC transporter membrane subunit FecD [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946816, updated on 6-May-2021

Summary

Gene symbol
fecD
Gene description
ferric citrate ABC transporter membrane subunit FecD
Primary source
ASAP:ABE-0014059
Locus tag
b4288
See related
ECOCYC:EG10289
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK4278
Summary
Probable false positive lipoprotein prediction, 9 CM TMs predicted, Cys not conserved. [More information is available at EcoGene: EG10289]. FecD is one of two (along with FecC) integral membrane protein components of the iron dicitrate ABC transporter. [More information is available at EcoCyc: EG10289].
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Genomic context

Sequence:
NC_000913.3 (4511458..4512414, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ferric citrate ABC transporter ATP binding subunit Neighboring gene ferric citrate ABC transporter membrane subunit FecC Neighboring gene ferric citrate ABC transporter periplasmic binding protein Neighboring gene ferric citrate outer membrane transporter

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables iron chelate transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within ion transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 
involved_in siderophore-dependent iron import into cell IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within siderophore-dependent iron import into cell IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ferric citrate ABC transporter membrane subunit FecD
NP_418708.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    4511458..4512414 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418708.1 ferric citrate ABC transporter membrane subunit FecD [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418708.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P15029
    Conserved Domains (1) summary
    PRK09777
    Location:1318
    fecD; Fe(3+) dicitrate ABC transporter permease subunit FecD
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