Format

Send to:

Choose Destination

atoE short chain fatty acid transporter [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946721, updated on 6-May-2021

Summary

Gene symbol
atoE
Gene description
short chain fatty acid transporter
Primary source
ASAP:ABE-0007353
Locus tag
b2223
See related
ECOCYC:EG11671
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2216
Summary
IT (Ion Transporter) superfamily (Prakash, 2003). [More information is available at EcoGene: EG11671]. AtoE is an inner membrane protein with ten predicted transmembrane domains. [More information is available at EcoCyc: EG11671].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_000913.3 (2324756..2326078)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene sensor histidine kinase AtoS Neighboring gene DNA-binding transcriptional activator/ornithine decarboxylase inhibitor AtoC Neighboring gene acetyl-CoA:acetoacetyl-CoA transferase subunit alpha Neighboring gene acetyl-CoA:acetoacetyl-CoA transferase subunit beta Neighboring gene acetyl-CoA acetyltransferase Neighboring gene DUF2135 domain-containing protein YfaP

General gene information

Gene Ontology Provided by GO

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
short chain fatty acid transporter

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2324756..2326078
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416727.1 short chain fatty acid transporter [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416727.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P76460
    Conserved Domains (1) summary
    pfam02667
    Location:1440
    SCFA_trans; Short chain fatty acid transporter
Support Center