Format

Send to:

Choose Destination

ccmD cytochrome c maturation protein D [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946709, updated on 6-May-2021

Summary

Gene symbol
ccmD
Gene description
cytochrome c maturation protein D
Primary source
ASAP:ABE-0007273
Locus tag
b2198
See related
ECOCYC:EG12169
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2190; yojM
Summary
CcmD stabilizes CcmE in the membrane. [More information is available at EcoGene: EG12169]. CcmD is an integral membrane protein that stabilizes the interaction between CcmC and CcmE for transfer of heme between the two proteins . [More information is available at EcoCyc: EG12169].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_000913.3 (2295377..2295586, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene holocytochrome c synthase CcmH component Neighboring gene thiol:disulfide oxidoreductase CcmG Neighboring gene holocytochrome c synthase CcmF component Neighboring gene periplasmic heme chaperone Neighboring gene cytochrome c maturation protein C Neighboring gene cytochrome c maturation protein B Neighboring gene cytochrome c maturation protein A Neighboring gene periplasmic nitrate reductase cytochrome c protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cytochrome complex assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in heme transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within heme transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within heme transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
is_active_in intrinsic component of the cytoplasmic side of the plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in intrinsic component of the cytoplasmic side of the plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
cytochrome c maturation protein D

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2295377..2295586 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416702.1 cytochrome c maturation protein D [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416702.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0ABM5
    Conserved Domains (1) summary
    COG3114
    Location:369
    CcmD; Heme exporter protein D [Intracellular trafficking, secretion, and vesicular transport]
Support Center