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cdd cytidine/deoxycytidine deaminase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946663, updated on 9-Mar-2022

Summary

Gene symbol
cdd
Gene description
cytidine/deoxycytidine deaminase
Primary source
ASAP:ABE-0007086
Locus tag
b2143
See related
ECOCYC:EG10137
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2136
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Genomic context

Sequence:
NC_000913.3 (2231844..2232728)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene tRNA-dihydrouridine(16) synthase Neighboring gene putative 3-hydroxypropanoate export protein YohJ Neighboring gene putative 3-hydroxypropanoate export protein YohK Neighboring gene DUF218 domain-containing protein SanA Neighboring gene DUF2542 domain-containing protein YeiS

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables cytidine deaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables cytidine deaminase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables cytidine deaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables deoxycytidine deaminase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables deoxycytidine deaminase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables pyrimidine nucleoside binding IDA
Inferred from Direct Assay
more info
PubMed 
enables zinc ion binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables zinc ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
cytidine/deoxycytidine deaminase
NP_416648.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2231844..2232728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416648.1 cytidine/deoxycytidine deaminase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416648.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0ABF6
    Conserved Domains (1) summary
    PRK09027
    Location:1294
    PRK09027; cytidine deaminase; Provisional